Barstow Research Team

Department of Biological and Environmental Engineering, Cornell University


You can find links for source code to all of our software on GitHub. Here are some of the most notable:

  • Knockout Sudoku is a method for very rapid, very low-cost construction of whole genome knockout collections. You can find the software needed to implement the method at GitHub and a step by step protocol at PeerJPreprints.
  • RewiredCarbon is a suite of programs for estimating the efficiency of electromicrobial production (aka microbial electrosynthesis, rewired carbon fixation). You can find the software implememtation of this framework at GitHub.
  • Macroscope Image Analyzer is a suite of programs for analysis of photographic high throughput screening data.